Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015848816.1_cds_XP_016510550.1_23375
CDS Infomation

[gene=LOC107827849] [db_xref=GeneID:107827849] [protein=ubiquitin carboxyl-terminal hydrolase 9-like] [protein_id=XP_016510550.1] [location=join(46530..46681,48447..48695,49194..49335,50040..50099,50202..50297,51557..51955,52043..52183,52571..52741,53101..53358,53498..53646,53994..54557,54643..54919,55127..55288)] [gbkey=CDS]
Sequence

ATGACGATTCCAGATTCGGGATACATGATGGAGAATGGATCTATTGAATTGCCTTGCACG
CCTGAAGAAGAGGCTAGGATCATTCAGGAGCTTATCAGCAAAGCTGAATCCAATTTGCGA
GAAGGCAATACCTATTATGTTATTTCTAACAGGTGGTTCAGGGATTGGCAGAGGTACATT
GGCAAGCCACTGGGTGCTTATCCCTTTAACGAGGACGCTACTCAATCTCAGCCTTTTCTA
TTTCCAAACACAGCTAGTAGACCTGGACCAATCGATAATAGTGATATAATAATTAGGGAA
ATTGATGGCGAGAGTGATGATCCCGAGCTTATCATAACTTTGGAAGAAGGGCGTGATTAT
GTGTTGGTCGCACAAGAAGTATGGGAGAAGCTCTCTGAATGGTACAAGGGAGGACCAGCA
TTGCCTCGAAAGATGATTTCTGTGGGAGATGCCAAGCAACTTAGCGTGGAAGTGTTCCCA
TTGTGTCTCAATTTACATGATACTAGAGATAGAAGTCACAAGGTTATAAGGTTAAGTAAA
AAGGCATCTTTACATGAACTTTATAGCATAGTGTGTAAGCTTAAAGGAATAGCACCAGAA
AAGGCACGCATCTGGGATTATTTTAATAAAAGGAAGTATACAGTATTAGTTGCTTCAGAC
CAAACACTTGAGGGCTCCAACTTGCAGATGGATCAAGATATTCTCCTGGAGGTGCAAGCT
GAAGGATTGCTTCCTTCTGGTTTTGGCTTCGATTCAACTGGAAACGACTTGGCTTTGGTT
CCAGTTGAACCACTGAGGTCATCTGTCACAATCGCTGGTGGTCCGACTTTGTCCAATGGT
TTTTCTGCTGGATATAGCTCTAATACGTATCAAGGGAGTTCTTTGAGCTCCACTTATGGT
GACATTGAGGATGGATATGATAGTATGAGACCTGCAAGTAAAGGTGAAAGGGGAGGGTTG
GCAGGACTGCAGAATTTGGGCAACACATGCTTCATGAATAGTGCAATTCAATGTCTGGTT
CATACCCCTCCACTTGTTGAGTACTTCTTGCAGGATTACACTGATGAGATCAACAGGCAG
AATCCTTTGGGGATGCATGGTGAACTTGCATTTGCATTTGGTGAACTATTGAGGAAACTT
TGGTCCTCCGGCCGGGCACCTGTTGCGCCACGTGCATTCAAAGGAAAACTTGGTCGATTT
GCTCCCCAGTTTAGTGGATATAACCAGCATGATTCTCAGGAACTACTTGCTTTCCTCTTG
GATGGATTACATGAAGATCTAAATCGTGTTAAGCAAAAACCGTACTTTGAGACAAAAGAC
TCAGATGGTCGTCCAGATGAAGAAGTTGCTGACGAGCTTTGGAGATATCACAGAGCCAGA
AATGACTCTGTTATAGTTGACACTTGTCAGGGTCAATATAAGTCTACTCTGGTTTGTCCG
GACTGCAACAAAATCTCAATAACATTTGACCCCTTCATGTATTTGTCTTTACCACTTCCT
TCAACAGTGACAAGGACAATGACAGTAACAGTGTTTTATAGTGATGGCAGTGGCCTTCCA
ATGCCATATACTGTTACTGTTTTGAAACATGGTTGTATTAAGGATCTTATACAGGCTTTA
GAAAGTGCATGCTGCTTAAGGACTGATGAATTCCTGCTACTTGCAGAGGTCTATGAGCAT
CGGATATTTCGATACTTTGAGAACCCTACAGATATGTTGAATTCAATCAAGGATGATGAA
CATATTGTTGCATACAGACTCCCGAAAAATGTGGCCCTATTAACAAGATTGGAGATTAGT
CATAGGTACCAGGACAAATGTATCATAGACAGTTCAAAGGCTAGTGAGAGGAAGTTGTTC
TTGACACCGCTTGTCACTTTCTTGGAAGACCCGCGTAATGGAGTTGATATTGATTTTTCT
GTCGATAAGGTGCTTTCTCCATTGAGAAGAAAAGCATTCATCTCACCAGAACCTGCTTTT
AAGGATGGTGCAGAAAATGGTTCTCCCTTGGAAAAGATTGAAGAACCAATGAACAGCTGT
ACTATTCAATTTGGTCATGAAGACAGATCAATGGAGTACACAGAACCAGTGGAAAATTCC
AGCAGGGGGATGGCATTTCATCTTTGTTTAACTGATGAACGAGGCACCTGCTGCAGGCCA
GTTGTAAAAGATACGGTGATACAACCAGCTAGAATGCTAAAGGTGATTTTGGATTGGACT
GAGAAGGAATATGAACTATATGATGCCAGCTACCTCAAGGATCTTCCTGAGGTTCACAAA
AGTGGACTTACAGTGAAGAAAACCAAGCAAGAAGCTATATCCTTATTTTCATGCTTGGAG
GCCTTCCTGAAGGAAGAACCTTTAGGACCAGATGATATGTGGTATTGTCCTGGCTGCAAG
GAGCATAGACAAGCCTCCAAGAAGTTAGATTTATGGAGATTACCTGACATACTTGTTTTC
CACTTAAAGCGGTTCTCTTATAGCCGATGGCTGAAGAACAAGCTTGATACCTTTGTGAAT
TTTCCCATACATAATTTGGATTTAAGCAAGTATGTGAAATGTAAGGATGCAACTGAGAGC
TCACATGTGTATGAGCTATACGCAATAAGCAACCATTATGGCGGATTAGGTGGTGGGCAT
TACACTGCTTACTGCAAGTTGATCGATGATGATAGATGGTATCATTTCGATGATTCCCAT
GTTTCAGCTGCCGCTGAATCTGATATCAAAACTTCAGCTGCATATGTGTTGTTCTATCGA
AGAGTTAAAGTTCAACAAAATGGAGTTGTGGGAGGGCCATCCAGCAATAGAAGCTCTTGA

Peptide Sequence

PEP ID

XP_016510550.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Nicotiana tabacum]
Sequence

MTIPDSGYMMENGSIELPCTPEEEARIIQELISKAESNLREGNTYYVISNRWFRDWQRYI
GKPLGAYPFNEDATQSQPFLFPNTASRPGPIDNSDIIIREIDGESDDPELIITLEEGRDY
VLVAQEVWEKLSEWYKGGPALPRKMISVGDAKQLSVEVFPLCLNLHDTRDRSHKVIRLSK
KASLHELYSIVCKLKGIAPEKARIWDYFNKRKYTVLVASDQTLEGSNLQMDQDILLEVQA
EGLLPSGFGFDSTGNDLALVPVEPLRSSVTIAGGPTLSNGFSAGYSSNTYQGSSLSSTYG
DIEDGYDSMRPASKGERGGLAGLQNLGNTCFMNSAIQCLVHTPPLVEYFLQDYTDEINRQ
NPLGMHGELAFAFGELLRKLWSSGRAPVAPRAFKGKLGRFAPQFSGYNQHDSQELLAFLL
DGLHEDLNRVKQKPYFETKDSDGRPDEEVADELWRYHRARNDSVIVDTCQGQYKSTLVCP
DCNKISITFDPFMYLSLPLPSTVTRTMTVTVFYSDGSGLPMPYTVTVLKHGCIKDLIQAL
ESACCLRTDEFLLLAEVYEHRIFRYFENPTDMLNSIKDDEHIVAYRLPKNVALLTRLEIS
HRYQDKCIIDSSKASERKLFLTPLVTFLEDPRNGVDIDFSVDKVLSPLRRKAFISPEPAF
KDGAENGSPLEKIEEPMNSCTIQFGHEDRSMEYTEPVENSSRGMAFHLCLTDERGTCCRP
VVKDTVIQPARMLKVILDWTEKEYELYDASYLKDLPEVHKSGLTVKKTKQEAISLFSCLE
AFLKEEPLGPDDMWYCPGCKEHRQASKKLDLWRLPDILVFHLKRFSYSRWLKNKLDTFVN
FPIHNLDLSKYVKCKDATESSHVYELYAISNHYGGLGGGHYTAYCKLIDDDRWYHFDDSH
VSAAAESDIKTSAAYVLFYRRVKVQQNGVVGGPSSNRSS

Transcript Sequence

Gene sequence data has not been registered.